Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cpne8Copine VIII. (575 aa)    
Predicted Functional Partners:
sergef
Secretion-regulating guanine nucleotide exchange factor.
   
  
 0.801
ano9b
Anoctamin.
      
 0.753
fibinb
Fin bud initiation factor; Essential for the initiation of pectoral fin bud formation. Potentially acts downstream of retinoic acid and Wnt signaling and is required for tbx5 expression in the lateral plate mesoderm of presumptive pectoral fin bud regions; Belongs to the FIBIN family.
      
 0.742
TMEM19
Transmembrane protein 19.
      
 0.737
caps2
Calcyphosine 2.
    
 
 0.720
ucmab
Unique cartilage matrix-associated protein C-terminal fragment; May be involved in the negative control of osteogenic differentiation of osteochondrogenic precursor cells in peripheral zones of fetal cartilage and at the cartilage-bone interface. Belongs to the UCMA family.
      
 0.715
znf536
Zinc finger protein 536.
      
 0.698
fibina
Fin bud initiation factor a.
      
 0.683
pkp3b
Plakophilin 3b.
      
 0.669
saal1
Protein saal1; Plays a role in promoting cell proliferation in response to proinflammatory stimuli; Belongs to the SAAL1 family.
      
 0.662
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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