Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
scamp5aSecretory carrier-associated membrane protein 5; Required for the calcium-dependent exocytosis of signal sequence-containing cytokines. Probably acts in cooperation with the SNARE machinery (By similarity); Belongs to the SCAMP family. SCAMP5 subfamily. (230 aa)    
Predicted Functional Partners:
gpatch11
G patch domain-containing protein 11.
    
 
 0.781
eif2s1a
Eukaryotic translation initiation factor 2, subunit 1 alpha, like.
      
 0.719
pigq
Phosphatidylinositol glycan anchor biosynthesis, class Q.
      
 0.600
CAMK2N1
Si:dkey-33m11.6.
      
 0.600
rab3c
RAB3C, member RAS oncogene family.
   
  
 0.584
camk2n1a
Calcium/calmodulin-dependent protein kinase II inhibitor 1a.
   
  
 0.572
rxfp3
Similar to G protein-coupled receptor 100.
      
 0.561
raf1a
Raf-1 proto-oncogene, serine/threonine kinase a.
      
 0.560
dennd1a
DENN/MADD domain-containing 1A.
      
 0.544
scamp3
Secretory carrier-associated membrane protein.
    
   0.536
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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