STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gnsaN-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family. (549 aa)    
Predicted Functional Partners:
gusb
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
  
 0.938
hexa
Beta-hexosaminidase.
   
 0.919
hexb
Beta-hexosaminidase.
   
 0.918
glb1
Beta-galactosidase.
  
 0.916
glb1l
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
  
 0.915
gnsb
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
  
  
0.904
ENSDARP00000133509
Si:ch211-114m9.1.
      
 0.859
lrrc9
Leucine-rich repeat-containing 9.
   
  
 0.833
arhgap44
Rho GTPase-activating protein 44.
      
 0.801
col28a2a
Collagen, type XXVIII, alpha 2a.
    
 
 0.752
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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