Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A5WW23_DANRE | cdv3 | ENSDARP00000104099 | ENSDARP00000031228 | Si:ch211-39k3.2. | Protein CDV3 homolog. | 0.435 |
asph | cdv3 | ENSDARP00000089980 | ENSDARP00000031228 | Aspartate beta-hydroxylase. | Protein CDV3 homolog. | 0.734 |
cdv3 | A5WW23_DANRE | ENSDARP00000031228 | ENSDARP00000104099 | Protein CDV3 homolog. | Si:ch211-39k3.2. | 0.435 |
cdv3 | asph | ENSDARP00000031228 | ENSDARP00000089980 | Protein CDV3 homolog. | Aspartate beta-hydroxylase. | 0.734 |
cdv3 | cnbpa | ENSDARP00000031228 | ENSDARP00000067292 | Protein CDV3 homolog. | CCHC-type zinc finger, nucleic acid-binding protein a. | 0.591 |
cdv3 | dap | ENSDARP00000031228 | ENSDARP00000000070 | Protein CDV3 homolog. | Death-associated protein. | 0.551 |
cdv3 | dkc1 | ENSDARP00000031228 | ENSDARP00000007628 | Protein CDV3 homolog. | Dyskeratosis congenita 1, dyskerin. | 0.448 |
cdv3 | pa2g4b | ENSDARP00000031228 | ENSDARP00000016160 | Protein CDV3 homolog. | Proliferation-associated 2G4, b. | 0.540 |
cdv3 | rpp40 | ENSDARP00000031228 | ENSDARP00000017777 | Protein CDV3 homolog. | Ribonuclease P 40 subunit like. | 0.574 |
cdv3 | smarca5 | ENSDARP00000031228 | ENSDARP00000107618 | Protein CDV3 homolog. | SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily a, member 5. | 0.519 |
cdv3 | tmem108 | ENSDARP00000031228 | ENSDARP00000110325 | Protein CDV3 homolog. | Transmembrane protein 108. | 0.861 |
cdv3 | topbp1 | ENSDARP00000031228 | ENSDARP00000153880 | Protein CDV3 homolog. | DNA topoisomerase II-binding protein 1. | 0.565 |
cnbpa | cdv3 | ENSDARP00000067292 | ENSDARP00000031228 | CCHC-type zinc finger, nucleic acid-binding protein a. | Protein CDV3 homolog. | 0.591 |
cnbpa | dkc1 | ENSDARP00000067292 | ENSDARP00000007628 | CCHC-type zinc finger, nucleic acid-binding protein a. | Dyskeratosis congenita 1, dyskerin. | 0.436 |
dap | cdv3 | ENSDARP00000000070 | ENSDARP00000031228 | Death-associated protein. | Protein CDV3 homolog. | 0.551 |
dap | rpp40 | ENSDARP00000000070 | ENSDARP00000017777 | Death-associated protein. | Ribonuclease P 40 subunit like. | 0.470 |
dkc1 | cdv3 | ENSDARP00000007628 | ENSDARP00000031228 | Dyskeratosis congenita 1, dyskerin. | Protein CDV3 homolog. | 0.448 |
dkc1 | cnbpa | ENSDARP00000007628 | ENSDARP00000067292 | Dyskeratosis congenita 1, dyskerin. | CCHC-type zinc finger, nucleic acid-binding protein a. | 0.436 |
dkc1 | pa2g4b | ENSDARP00000007628 | ENSDARP00000016160 | Dyskeratosis congenita 1, dyskerin. | Proliferation-associated 2G4, b. | 0.824 |
dkc1 | rpp40 | ENSDARP00000007628 | ENSDARP00000017777 | Dyskeratosis congenita 1, dyskerin. | Ribonuclease P 40 subunit like. | 0.598 |
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