STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c4Complement component 4. (1700 aa)    
Predicted Functional Partners:
c4b
Complement 4B (Chido blood group).
  
 
 
0.823
cfi
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 0.823
aspdh
Putative L-aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
   
  
 0.810
F1QJB3_DANRE
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.795
masp1
Mannan-binding lectin serine peptidase 1; Belongs to the peptidase S1 family.
    
 0.761
c1r
Complement component 1, r subcomponent; Belongs to the peptidase S1 family.
   
 0.708
c9
Complement component 9.
   
 
 0.697
cyp2p9
Cytochrome P450, family 2, subfamily P, polypeptide 9; Belongs to the cytochrome P450 family.
   
  
 0.694
cfb
Complement factor B; Belongs to the peptidase S1 family.
   
 0.633
ppm1k
Protein phosphatase, Mg2+/Mn2+-dependent, 1K.
   
  
 0.618
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.