Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mfsd4aaMajor facilitator superfamily domain-containing protein 4A. (526 aa)    
Predicted Functional Partners:
cuzd1.2
CUB and zona pellucida-like domains 1, tandem duplicate 2.
   
 0.928
LOC110437703
CUB and zona pellucida-like domains 1, tandem duplicate 1.
    
 0.806
sox4b
Transcription factor SOX.
    
 
 0.667
lrfn2
Uncharacterized protein.
    
 0.590
mfsd9
Major facilitator superfamily domain-containing 9.
      
 0.544
unc93a
Protein unc-93 homolog A.
      
 0.521
vwa1
Von Willebrand factor A domain-containing 1.
   
  0.513
SLC46A3
Si:dkey-5g14.1.
    
 0.504
svopl
Putative transporter SVOPL.
      
 0.471
c2cd4a
C2 calcium-dependent domain-containing 4A.
    
 
 0.464
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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