Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC110437703 | c2cd4a | ENSDARP00000128432 | ENSDARP00000082020 | CUB and zona pellucida-like domains 1, tandem duplicate 1. | C2 calcium-dependent domain-containing 4A. | 0.463 |
LOC110437703 | lrfn2 | ENSDARP00000128432 | ENSDARP00000143402 | CUB and zona pellucida-like domains 1, tandem duplicate 1. | Uncharacterized protein. | 0.584 |
LOC110437703 | mfsd4aa | ENSDARP00000128432 | ENSDARP00000032062 | CUB and zona pellucida-like domains 1, tandem duplicate 1. | Major facilitator superfamily domain-containing protein 4A. | 0.904 |
LOC110437703 | mlnl | ENSDARP00000128432 | ENSDARP00000115621 | CUB and zona pellucida-like domains 1, tandem duplicate 1. | Motilin-like. | 0.479 |
LOC110437703 | pax4 | ENSDARP00000128432 | ENSDARP00000013792 | CUB and zona pellucida-like domains 1, tandem duplicate 1. | Paired box 4. | 0.420 |
LOC110437703 | sox4b | ENSDARP00000128432 | ENSDARP00000150987 | CUB and zona pellucida-like domains 1, tandem duplicate 1. | Transcription factor SOX. | 0.670 |
c2cd4a | LOC110437703 | ENSDARP00000082020 | ENSDARP00000128432 | C2 calcium-dependent domain-containing 4A. | CUB and zona pellucida-like domains 1, tandem duplicate 1. | 0.463 |
c2cd4a | cuzd1.2 | ENSDARP00000082020 | ENSDARP00000129600 | C2 calcium-dependent domain-containing 4A. | CUB and zona pellucida-like domains 1, tandem duplicate 2. | 0.463 |
c2cd4a | mfsd4aa | ENSDARP00000082020 | ENSDARP00000032062 | C2 calcium-dependent domain-containing 4A. | Major facilitator superfamily domain-containing protein 4A. | 0.453 |
cuzd1.2 | c2cd4a | ENSDARP00000129600 | ENSDARP00000082020 | CUB and zona pellucida-like domains 1, tandem duplicate 2. | C2 calcium-dependent domain-containing 4A. | 0.463 |
cuzd1.2 | lrfn2 | ENSDARP00000129600 | ENSDARP00000143402 | CUB and zona pellucida-like domains 1, tandem duplicate 2. | Uncharacterized protein. | 0.584 |
cuzd1.2 | mfsd4aa | ENSDARP00000129600 | ENSDARP00000032062 | CUB and zona pellucida-like domains 1, tandem duplicate 2. | Major facilitator superfamily domain-containing protein 4A. | 0.909 |
cuzd1.2 | mlnl | ENSDARP00000129600 | ENSDARP00000115621 | CUB and zona pellucida-like domains 1, tandem duplicate 2. | Motilin-like. | 0.479 |
cuzd1.2 | pax4 | ENSDARP00000129600 | ENSDARP00000013792 | CUB and zona pellucida-like domains 1, tandem duplicate 2. | Paired box 4. | 0.420 |
cuzd1.2 | sox4b | ENSDARP00000129600 | ENSDARP00000150987 | CUB and zona pellucida-like domains 1, tandem duplicate 2. | Transcription factor SOX. | 0.670 |
lrfn2 | LOC110437703 | ENSDARP00000143402 | ENSDARP00000128432 | Uncharacterized protein. | CUB and zona pellucida-like domains 1, tandem duplicate 1. | 0.584 |
lrfn2 | cuzd1.2 | ENSDARP00000143402 | ENSDARP00000129600 | Uncharacterized protein. | CUB and zona pellucida-like domains 1, tandem duplicate 2. | 0.584 |
lrfn2 | mfsd4aa | ENSDARP00000143402 | ENSDARP00000032062 | Uncharacterized protein. | Major facilitator superfamily domain-containing protein 4A. | 0.586 |
mfsd4aa | LOC110437703 | ENSDARP00000032062 | ENSDARP00000128432 | Major facilitator superfamily domain-containing protein 4A. | CUB and zona pellucida-like domains 1, tandem duplicate 1. | 0.904 |
mfsd4aa | c2cd4a | ENSDARP00000032062 | ENSDARP00000082020 | Major facilitator superfamily domain-containing protein 4A. | C2 calcium-dependent domain-containing 4A. | 0.453 |
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