STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhoqRas homolog gene family, member Q. (205 aa)    
Predicted Functional Partners:
exoc7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
    
 0.942
rapgef1b
Rap guanine nucleotide exchange factor (GEF) 1b.
   
 0.925
rapgef1a
Rap guanine nucleotide exchange factor (GEF) 1a.
    
 0.925
trip10a
Cdc42-interacting protein 4 homolog; Required to coordinate membrane tubulation with reorganization of the actin cytoskeleton during endocytosis. Belongs to the FNBP1 family.
    
 0.923
crk
V-crk sarcoma virus CT10 oncogene homolog (Avian).
   
 
 0.912
crkl
V-crk sarcoma virus CT10 oncogene homolog (Avian)-like.
   
 
 0.911
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.850
itsn2a
Intersectin 2a.
    
 
 0.791
itsn2b
Intersectin 2b.
   
 
 0.791
psmg2
Proteasome assembly chaperone 2; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with psmg1; Belongs to the PSMG2 family.
      
 0.745
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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