Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
kcnn1aPotassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a. (916 aa)    
Predicted Functional Partners:
kcnma1a
Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.
   
 
 0.911
kcnma1b
Uncharacterized protein.
   
 
 0.911
E7FCW4_DANRE
Si:ch211-247n2.1.
     
 0.794
kcnn4
Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4.
     
 0.774
kcnt1
Potassium channel, subfamily T, member 1.
   
 
 0.762
calm1b
Calmodulin 1b.
    
 
 0.749
syt9a
Synaptotagmin IXa.
   
  
 0.721
syt6a
Synaptotagmin VIa.
   
  
 0.694
faim2a
Fas apoptotic inhibitory molecule 2a; Belongs to the BI1 family.
      
 0.688
apba1a
Amyloid beta (A4) precursor protein-binding, family A, member 1a.
      
 0.688
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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