Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
myo9abUnconventional myosin-IXAb; Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Regulates Rho by stimulating it's GTPase activity in neurons (By similarity). Required for the regulation of neurite branching and motor neuron axon guidance. (2286 aa)    
Predicted Functional Partners:
smarcc1b
SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin, subfamily c, member 1b.
      
 0.886
MYO9B
Si:zfos-588f8.1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
  0.808
E7F8P5_DANRE
Si:ch73-127m5.1; Belongs to the peptidase S1 family.
      
 0.757
F1QX88_DANRE
Si:ch211-51a6.2; Belongs to the peptidase S1 family.
      
 0.720
gmppb
Mannose-1-phosphate guanyltransferase beta; Catalyzes the formation of GDP-mannose, an essential precursor of glycan moieties of glycoproteins and glycolipids.
     
 0.689
prss12
Serine protease 12; Belongs to the peptidase S1 family.
      
 0.681
syt10
Synaptotagmin X.
      
 0.661
ubr4
Ubiquitin protein ligase E3 component n-recognin 4.
   
  
 0.598
uap1l1
UDP-N-acetylhexosamine pyrophosphorylase-like protein 1; Belongs to the UDPGP type 1 family.
     
 0.593
uap1
UDP-N-acetylglucosamine pyrophosphorylase 1.
     
 0.593
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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