tmpob protein (Danio rerio) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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[Homology]

Score

tmpob

Thymopoietin b. (360 aa)

Predicted Functional Partners:

usp7

0.936

banf1

0.883

Q1L957_DANRE

0.804

lemd3

0.775

nup133

0.771

nle1

0.760

lmnb1

0.748

lmna

0.732

lmnl3

0.683

lmnb2

0.683

Your Current Organism:

Danio rerio

NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Q1L957_DANRE	lemd3	ENSDARP00000118510	ENSDARP00000005474	Si:dkey-211g8.4.	LEM domain-containing 3.	0.827
Q1L957_DANRE	lmna	ENSDARP00000118510	ENSDARP00000156524	Si:dkey-211g8.4.	Lamin A; Belongs to the intermediate filament family.	0.896
Q1L957_DANRE	lmnb1	ENSDARP00000118510	ENSDARP00000105955	Si:dkey-211g8.4.	Lamin B1; Belongs to the intermediate filament family.	0.835
Q1L957_DANRE	lmnb2	ENSDARP00000118510	ENSDARP00000139279	Si:dkey-211g8.4.	Lamin B2; Belongs to the intermediate filament family.	0.896
Q1L957_DANRE	lmnl3	ENSDARP00000118510	ENSDARP00000028051	Si:dkey-211g8.4.	Lamin L3; Belongs to the intermediate filament family.	0.840
Q1L957_DANRE	nup133	ENSDARP00000118510	ENSDARP00000023984	Si:dkey-211g8.4.	Nuclear pore complex protein Nup133; Involved in poly(A)+ RNA transport (By similarity). Involved in nephrogenesis.	0.472
Q1L957_DANRE	tmpob	ENSDARP00000118510	ENSDARP00000033049	Si:dkey-211g8.4.	Thymopoietin b.	0.804
banf1	lemd3	ENSDARP00000053793	ENSDARP00000005474	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	LEM domain-containing 3.	0.827
banf1	lmna	ENSDARP00000053793	ENSDARP00000156524	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	Lamin A; Belongs to the intermediate filament family.	0.884
banf1	lmnb1	ENSDARP00000053793	ENSDARP00000105955	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	Lamin B1; Belongs to the intermediate filament family.	0.820
banf1	lmnb2	ENSDARP00000053793	ENSDARP00000139279	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	Lamin B2; Belongs to the intermediate filament family.	0.884
banf1	lmnl3	ENSDARP00000053793	ENSDARP00000028051	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	Lamin L3; Belongs to the intermediate filament family.	0.760
banf1	tmpob	ENSDARP00000053793	ENSDARP00000033049	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	Thymopoietin b.	0.883
lemd3	Q1L957_DANRE	ENSDARP00000005474	ENSDARP00000118510	LEM domain-containing 3.	Si:dkey-211g8.4.	0.827
lemd3	banf1	ENSDARP00000005474	ENSDARP00000053793	LEM domain-containing 3.	Barrier-to-autointegration factor; Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non- specific dsDNA-binding sites which may promote DNA cross-bridging (By similarity).	0.827
lemd3	lmna	ENSDARP00000005474	ENSDARP00000156524	LEM domain-containing 3.	Lamin A; Belongs to the intermediate filament family.	0.777
lemd3	lmnb1	ENSDARP00000005474	ENSDARP00000105955	LEM domain-containing 3.	Lamin B1; Belongs to the intermediate filament family.	0.777
lemd3	lmnb2	ENSDARP00000005474	ENSDARP00000139279	LEM domain-containing 3.	Lamin B2; Belongs to the intermediate filament family.	0.777
lemd3	lmnl3	ENSDARP00000005474	ENSDARP00000028051	LEM domain-containing 3.	Lamin L3; Belongs to the intermediate filament family.	0.777
lemd3	tmpob	ENSDARP00000005474	ENSDARP00000033049	LEM domain-containing 3.	Thymopoietin b.	0.775

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