Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
anxa5aAnnexin. (316 aa)    
Predicted Functional Partners:
s100a10a
Protein S100; Belongs to the S-100 family.
   
 0.743
dysf
Dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive).
   
 
 0.681
cd63
Tetraspanin.
   
 
 0.661
naa15a
N(alpha)-acetyltransferase 15, NatA auxiliary subunit a.
      
 0.643
F1QQL4_DANRE
Si:ch211-125o16.4.
    
  0.639
acta1b
Actin alpha 1, skeletal muscle b.
    
 
 0.636
cd9a
Tetraspanin.
   
 
 0.570
casp3a
Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.
    
 
 0.558
casp3b
Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.
    
 
 0.557
ano5b
Anoctamin.
      
 0.554
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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