STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
synj2bpSynaptojanin 2-binding protein. (152 aa)    
Predicted Functional Partners:
ENSDARP00000136103
Si:ch211-126j24.1.
      
 0.743
zmp:0000000755
Uncharacterized protein.
      
 0.743
rrbp1a
Ribosome-binding protein 1a.
   
 
 0.740
rrbp1b
Ribosome-binding protein 1b.
    
 
 0.738
bcap31
Novel protein similar to vertebrate caldesmon 1 (CALD1).
   
  
 0.686
cluha
Clustered mitochondria protein homolog; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria; Belongs to the CLU family.
   
 
 0.660
cox7c
Cytochrome c oxidase, subunit VIIc.
   
  
 0.605
tmem238a
Transmembrane protein 238a.
    
 
 0.572
si:dkey-16i5.8
Si:dkey-16i5.8.
    
 
 0.572
E7F694_DANRE
Si:dkeyp-72e1.6.
    
 
 0.572
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.