STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc22a7b.1Solute carrier family 22 member 7b, tandem duplicate 1. (546 aa)    
Predicted Functional Partners:
slc2a1b
Solute carrier family 2 member 1b; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
  
 
 0.726
ttbk1b
Tau tubulin kinase 1b.
    
 
 0.721
slc29a3
Solute carrier family 29 member 3.
    
 
 0.718
ttbk1a
Tau tubulin kinase 1a.
    
 
 0.709
slc17a5
Solute carrier family 17 member 5.
  
 
 0.657
ostm1
Osteoclastogenesis-associated transmembrane protein 1.
      
 0.590
slc31a1
Solute carrier family 31 member 1.
      
 0.585
txlnbb
Taxilin beta b.
      
 0.558
clcn7
Chloride channel protein.
   
 
 0.539
slc2a1a
Facilitated glucose transporter 1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
  
 
 0.515
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.