Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
gpatch11G patch domain-containing protein 11. (262 aa)    
Predicted Functional Partners:
rbm17
RNA-binding motif protein 17.
   
 
 0.972
zrsr2
Zinc finger (CCCH type), RNA-binding motif and serine/arginine-rich 2.
    
 
 0.936
snrpa1
Small nuclear ribonucleoprotein polypeptide A.
   
 
 0.901
pigq
Phosphatidylinositol glycan anchor biosynthesis, class Q.
      
 0.816
eif2s1a
Eukaryotic translation initiation factor 2, subunit 1 alpha, like.
   
 
 0.806
scamp5a
Secretory carrier-associated membrane protein 5; Required for the calcium-dependent exocytosis of signal sequence-containing cytokines. Probably acts in cooperation with the SNARE machinery (By similarity); Belongs to the SCAMP family. SCAMP5 subfamily.
    
 
 0.781
sf3a3
Splicing factor 3a, subunit 3.
   
 
 0.760
ccdc130
Coiled-coil domain-containing protein 130 homolog; Belongs to the CWC16 family.
    
 
 0.741
snrpf
Small nuclear ribonucleoprotein polypeptide F.
    
 
 0.734
pde12
Phosphodiesterase 12.
    
 
 0.709
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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