STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc38a3aSolute carrier family 38 member 3a. (521 aa)    
Predicted Functional Partners:
ENSDARP00000129086
Neogenin 1b.
      
 0.955
hcn4l
Hyperpolarization-activated cyclic nucleotide-gated potassium channel 4l.
      
 0.808
ENSDARP00000154157
Uncharacterized protein.
      
 0.802
si:dkey-65j6.2
Si:dkey-65j6.2.
      
 0.748
dclk1b
Doublecortin-like kinase 1b.
      
 0.747
hcn2b
Hyperpolarization-activated cyclic nucleotide-gated potassium channel 2b.
      
 0.566
galnt10
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10).
      
 0.564
LOC100334297
Hyperpolarization-activated cyclic nucleotide-gated potassium channel 1.
      
 0.563
LOC100332721
Neogenin 1b.
      
 0.561
GALNT10
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.557
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.