Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
slc38a3aSolute carrier family 38 member 3a. (521 aa)    
Predicted Functional Partners:
ENSDARP00000129086
Neogenin 1b.
      
 0.902
hcn4l
Hyperpolarization-activated cyclic nucleotide-gated potassium channel 4l.
      
 0.690
ENSDARP00000154157
Uncharacterized protein.
      
 0.684
slc4a4b
Anion exchange protein.
   
  
 0.665
si:dkey-65j6.2
Si:dkey-65j6.2.
      
 0.665
kcnj1a.5
Potassium inwardly rectifying channel subfamily J member 1a, tandem duplicate 5.
      
 0.661
kcnj1a.2
Potassium inwardly rectifying channel subfamily J member 1a, tandem duplicate 2.
      
 0.661
kcnj1a.3
Potassium inwardly rectifying channel subfamily J member 1a, tandem duplicate 3.
      
 0.661
kcnj1a.4
Potassium inwardly rectifying channel subfamily J member 1a, tandem duplicate 4.
      
 0.661
slco2b1
Solute carrier organic anion transporter family member.
    
 
 0.603
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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