STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
necab1N-terminal EF-hand calcium-binding protein 1. (348 aa)    
Predicted Functional Partners:
efhc2
EF-hand domain-containing family member C2.
    
 
 0.699
efcab11
EF-hand calcium-binding domain-containing protein 11.
    
 
 0.697
efcc1
EF-hand and coiled-coil domain-containing 1.
      
 0.695
ppef1
Serine/threonine-protein phosphatase with EF-hands.
   
 
 0.693
ctxn1-2
Cortexin 1.
      
 0.670
ctxn1
Uncharacterized protein.
      
 0.670
fn3krp
Fructosamine 3 kinase-related protein; Belongs to the fructosamine kinase family.
      
 0.669
calhm2.1
Calcium homeostasis modulator family member 2, tandem duplicate 1.
      
 0.644
zmat4b
Zinc finger, matrin-type 4b.
      
 0.644
kcng4a
Potassium voltage-gated channel, subfamily G, member 4a; Belongs to the potassium channel family.
    
 
 0.636
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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