STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C18H11orf58Small acidic protein; Belongs to the SMAP family. (171 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1A; Belongs to the SKP1 family.
   
    0.785
cdc123
Cell division cycle protein 123 homolog; Required for S phase entry of the cell cycle; Belongs to the CDC123 family.
   
    0.644
tiprl
TIP41, TOR-signaling pathway regulator-like (S. cerevisiae).
   
  
 0.587
sub1a
SUB1 regulator of transcription a.
   
    0.551
sub1b
SUB1 regulator of transcription b.
   
    0.519
map2k7
Mitogen-activated protein kinase kinase 7.
      
 0.453
ecrg4b
Augurin-B; Probable hormone (By similarity). Required for the proper formation of the central nervous system by attenuating cell proliferation during development (By similarity). Belongs to the augurin family.
      
 0.451
mrvi1
Murine retrovirus integration site 1 homolog.
      
 0.414
nedd9
Neural precursor cell-expressed, developmentally down-regulated 9.
      
 0.412
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.