Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C18H11orf58Small acidic protein; Belongs to the SMAP family. (171 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1A; Belongs to the SKP1 family.
   
    0.848
cdc123
Cell division cycle protein 123 homolog; Required for S phase entry of the cell cycle; Belongs to the CDC123 family.
   
    0.644
tiprl
TIP41, TOR-signaling pathway regulator-like (S. cerevisiae).
   
  
 0.614
sub1b
SUB1 regulator of transcription b.
   
    0.550
gpr142
G-protein coupled receptor 142.
      
 0.536
ecrg4b
Augurin-B; Probable hormone (By similarity). Required for the proper formation of the central nervous system by attenuating cell proliferation during development (By similarity). Belongs to the augurin family.
      
 0.487
angptl7
Angiopoietin-like 7.
      
 0.458
pcnp
PEST proteolytic signal-containing nuclear protein.
   
    0.448
LOC110437793
Uncharacterized protein.
   
    0.448
nsfl1c
NSFL1 (p97) cofactor (p47).
   
  
 0.429
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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