STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tescaTescalcin a. (218 aa)    
Predicted Functional Partners:
syt15
Synaptotagmin XV.
      
 0.690
chrnb3b
Cholinergic receptor, nicotinic, beta polypeptide 3b.
      
 0.650
cadps2
Ca++-dependent secretion activator 2.
      
 0.627
KCNIP1
Potassium voltage-gated channel interacting protein 1.
    
 
 0.608
chrnb4
Cholinergic receptor, nicotinic, beta 4 (neuronal).
      
 0.561
fkbp3
Peptidylprolyl isomerase.
   
 
 0.550
fkbp1b
Peptidylprolyl isomerase.
   
 
 0.548
fkbp1aa
Peptidylprolyl isomerase.
   
 
 0.548
fkbp1ab
Peptidylprolyl isomerase.
   
 
 0.548
chrna4b
Neuronal nicotinic acetylcholine receptor alpha 4 subunit.
      
 0.540
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.