STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem169aTransmembrane protein 169a. (292 aa)    
Predicted Functional Partners:
lpar2a
Lysophosphatidic acid receptor 2a; Belongs to the G-protein coupled receptor 1 family.
      
 0.860
slc10a4
Solute carrier family 10 member 4.
      
 0.841
lpar2b
Lysophosphatidic acid receptor 2b; Belongs to the G-protein coupled receptor 1 family.
      
 0.838
nkain1
Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1; Belongs to the NKAIN family.
      
 0.835
tns1b
Tensin 1b.
      
 0.669
LOC100332538
Endothelin-converting enzyme-like 1.
      
 0.666
LOC569071
Protein tyrosine phosphatase receptor type H.
      
 0.540
ptprh
Protein tyrosine phosphatase receptor type H.
      
 0.540
slc26a10
Solute carrier family 26 member 10.
      
 0.482
igfbp2a
Insulin-like growth factor-binding protein 2-A; IGF-binding proteins prolong the half-life of the IGFs and have been shown to either inhibit or stimulate the growth promoting effects of the IGFs on cell culture. They alter the interaction of IGFs with their cell surface receptors.
      
 0.446
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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