STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zgc:111983Zgc:111983. (437 aa)    
Predicted Functional Partners:
f13a1a.1
Coagulation factor XIII, A1 polypeptide a, tandem duplicate 1.
    
 
 0.743
sult1st3
Cytosolic sulfotransferase 3; Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfate conjugation of a variety of xenobiotic and endogenous compounds, including dopamine, T3 (triiodo-L-thyronine), T4 (thyroxine), estrone, DHEA (dehydroepiandrosterone), flavonoids, isoflavonoids and other phenolic compounds.
   
  
 0.715
cpn1
Carboxypeptidase N, polypeptide 1.
   
  
 0.671
cpn1-2
Carboxypeptidase N, polypeptide 1.
   
  
 0.670
vtg3
Vitellogenin 3, phosvitinless.
      
 0.542
ubn2a
Ubinuclein 2a.
    
 
 0.507
nitr3b
Novel immune-type receptor 3c.
    
 
 0.474
morc3b
MORC family CW-type zinc finger 3b.
      
 0.452
cfap100
Cilia and flagella-associated protein 100.
      
 0.452
slc2a11l
Solute carrier family 2 member 11,-like; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.450
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.