Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VSTM2AZgc:110852. (229 aa)    
Predicted Functional Partners:
arhgap20
Rho GTPase-activating protein 20.
      
 0.661
wfdc2
WAP four-disulfide core domain 2.
      
 0.594
best4
Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family.
      
 0.594
mbtps1
Membrane-bound transcription factor peptidase, site 1.
      
 0.523
sec61g
SEC61 translocon gamma subunit.
      
 0.496
ccn5
Cellular communication network factor 5.
      
 0.489
scg2b
Secretogranin II (chromogranin C), b.
   
  
 0.480
naa35
N-alpha-acetyltransferase 35, NatC auxiliary subunit; Auxillary component of the N-terminal acetyltransferase C (NatC) complex which catalyzes acetylation of N-terminal methionine residues. Regulates cell proliferation during embryonic development. May be involved in acetylating the N-terminus of mtor. Belongs to the MAK10 family.
      
 0.477
sumf2
Sulfatase-modifying factor 2.
      
 0.436
rln3a
Relaxin family locus C type 2.
      
 0.433
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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