STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adra1aaAdrenoceptor alpha 1Aa. (485 aa)    
Predicted Functional Partners:
gnaq
Guanine nucleotide-binding protein (G protein), q polypeptide.
    
 0.922
gna11b
Guanine nucleotide-binding protein (G protein), alpha 11b (Gq class).
    
 0.922
gna13b
Guanine nucleotide-binding protein (G protein), alpha 13b.
    
 0.920
gna12a
Guanine nucleotide-binding protein (G protein) alpha 12a.
    
 0.920
gna13a
Guanine nucleotide-binding protein (G protein), alpha 13a.
    
 0.920
gna14a
Guanine nucleotide-binding protein (G protein), alpha 14a.
    
 0.727
gna15.4
Guanine nucleotide-binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
 0.686
gna15.1
Guanine nucleotide-binding protein (G protein), alpha 15 (Gq class), tandem duplicate 1.
    
 0.686
gna14
Guanine nucleotide-binding protein (G protein), alpha 14.
    
  0.685
PLCB1
Phosphoinositide phospholipase C.
   
 
 0.651
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.