Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cdt1 | hmga1a | ENSDARP00000089247 | ENSDARP00000036107 | Chromatin licensing and DNA replication factor 1. | High mobility group AT-hook 1a. | 0.460 |
hepacama | hipk1a | ENSDARP00000124635 | ENSDARP00000156528 | Hepatic and glial cell adhesion molecule a. | Homeodomain-interacting protein kinase 1a. | 0.691 |
hepacama | hmga1a | ENSDARP00000124635 | ENSDARP00000036107 | Hepatic and glial cell adhesion molecule a. | High mobility group AT-hook 1a. | 0.480 |
hepacama | hmgb2a | ENSDARP00000124635 | ENSDARP00000047158 | Hepatic and glial cell adhesion molecule a. | High mobility group box 2a. | 0.452 |
hipk1a | hepacama | ENSDARP00000156528 | ENSDARP00000124635 | Homeodomain-interacting protein kinase 1a. | Hepatic and glial cell adhesion molecule a. | 0.691 |
hipk1a | hmga1a | ENSDARP00000156528 | ENSDARP00000036107 | Homeodomain-interacting protein kinase 1a. | High mobility group AT-hook 1a. | 0.551 |
hipk1a | hmgb2a | ENSDARP00000156528 | ENSDARP00000047158 | Homeodomain-interacting protein kinase 1a. | High mobility group box 2a. | 0.478 |
hmga1a | cdt1 | ENSDARP00000036107 | ENSDARP00000089247 | High mobility group AT-hook 1a. | Chromatin licensing and DNA replication factor 1. | 0.460 |
hmga1a | hepacama | ENSDARP00000036107 | ENSDARP00000124635 | High mobility group AT-hook 1a. | Hepatic and glial cell adhesion molecule a. | 0.480 |
hmga1a | hipk1a | ENSDARP00000036107 | ENSDARP00000156528 | High mobility group AT-hook 1a. | Homeodomain-interacting protein kinase 1a. | 0.551 |
hmga1a | hmgb2a | ENSDARP00000036107 | ENSDARP00000047158 | High mobility group AT-hook 1a. | High mobility group box 2a. | 0.485 |
hmga1a | mybl1 | ENSDARP00000036107 | ENSDARP00000066654 | High mobility group AT-hook 1a. | V-myb avian myeloblastosis viral oncogene homolog-like 1. | 0.453 |
hmga1a | olfcq3 | ENSDARP00000036107 | ENSDARP00000048181 | High mobility group AT-hook 1a. | Olfactory receptor C family, q3. | 0.664 |
hmga1a | prmt6 | ENSDARP00000036107 | ENSDARP00000106043 | High mobility group AT-hook 1a. | Protein arginine N-methyltransferase 6; Arginine methyltransferase that can catalyze the formation of both omega-N monomethylarginine (MMA) and asymmetrical dimethylarginine (aDMA), with a strong preference for the formation of aDMA. Preferentially methylates arginyl residues present in a glycine and arginine-rich domain and displays preference for monomethylated substrates. Specifically mediates the asymmetric dimethylation of histone H3 'Arg-2' to form H3R2me2a. H3R2me2a represents a specific tag for epigenetic transcriptional repression and is mutually exclusive with methylation on [...] | 0.608 |
hmga1a | snrpc | ENSDARP00000036107 | ENSDARP00000010253 | High mobility group AT-hook 1a. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. snrpc/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] | 0.467 |
hmga1a | tmprss13b | ENSDARP00000036107 | ENSDARP00000079274 | High mobility group AT-hook 1a. | Transmembrane serine protease 13b; Belongs to the peptidase S1 family. | 0.541 |
hmga1a | trpc2a | ENSDARP00000036107 | ENSDARP00000128510 | High mobility group AT-hook 1a. | Transient receptor potential cation channel subfamily C member 2a. | 0.569 |
hmgb2a | hepacama | ENSDARP00000047158 | ENSDARP00000124635 | High mobility group box 2a. | Hepatic and glial cell adhesion molecule a. | 0.452 |
hmgb2a | hipk1a | ENSDARP00000047158 | ENSDARP00000156528 | High mobility group box 2a. | Homeodomain-interacting protein kinase 1a. | 0.478 |
hmgb2a | hmga1a | ENSDARP00000047158 | ENSDARP00000036107 | High mobility group box 2a. | High mobility group AT-hook 1a. | 0.485 |
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