Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
znf804aZinc finger protein 804A. (1132 aa)    
Predicted Functional Partners:
znf804b
Zinc finger protein 804B.
   
   0.920
csmd1a
CUB and Sushi multiple domains 1a.
      
 0.779
sall3b
Spalt-like transcription factor 3b.
      
 0.662
snap91a
Synaptosome-associated protein 91a.
      
 0.662
disc1
DISC1 scaffold protein.
      
 0.612
otulina
OTU deubiquitinase with linear linkage-specificity a.
      
 0.607
znf536
Zinc finger protein 536.
      
 0.594
vrk2
VRK serine/threonine kinase 2.
      
 0.590
cnnm2b
Cyclin and CBS domain divalent metal cation transport mediator 2b.
      
 0.589
cacna1c
Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
   
  
 0.577
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.