Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cd226CD226 molecule. (344 aa)    
Predicted Functional Partners:
E7F6D0_DANRE
Si:ch73-22o12.1.
   
0.999
itgb2
Integrin beta.
   
 0.959
zmp:0000001082
Zmp:0000001082; Belongs to the integrin alpha chain family.
    
 0.953
pvrl2l
PVR cell adhesion molecule-related 2-like.
   
0.948
itgb1a
Integrin beta; Belongs to the integrin beta chain family.
    
 0.739
itgb7
Integrin beta; Belongs to the integrin beta chain family.
    
 0.739
ENSDARP00000147407
Integrin beta.
    
 0.739
rttn
Rotatin.
 
   
 0.735
crtam
Ig-like domain-containing protein.
      
 0.720
cd4-1
CD4-1 molecule.
   
 
 0.705
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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