Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| chd3 | chd4a | ENSDARP00000127601 | ENSDARP00000111640 | Chromodomain helicase DNA-binding protein 3. | Chromodomain helicase DNA-binding protein 4a. | 0.574 |
| chd3 | chd4b | ENSDARP00000127601 | ENSDARP00000152065 | Chromodomain helicase DNA-binding protein 3. | Chromodomain helicase DNA-binding protein 4b. | 0.814 |
| chd3 | chd5 | ENSDARP00000127601 | ENSDARP00000133704 | Chromodomain helicase DNA-binding protein 3. | Chromodomain helicase DNA-binding protein 5. | 0.551 |
| chd3 | gatad2b | ENSDARP00000127601 | ENSDARP00000036714 | Chromodomain helicase DNA-binding protein 3. | GATA zinc finger domain-containing 2B. | 0.960 |
| chd3 | hdac1 | ENSDARP00000127601 | ENSDARP00000051798 | Chromodomain helicase DNA-binding protein 3. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.987 |
| chd3 | mta1 | ENSDARP00000127601 | ENSDARP00000152737 | Chromodomain helicase DNA-binding protein 3. | Metastasis-associated 1. | 0.913 |
| chd3 | mta2 | ENSDARP00000127601 | ENSDARP00000119097 | Chromodomain helicase DNA-binding protein 3. | Metastasis-associated 1 family, member 2. | 0.877 |
| chd3 | mta3 | ENSDARP00000127601 | ENSDARP00000107969 | Chromodomain helicase DNA-binding protein 3. | Metastasis-associated 1 family, member 3. | 0.819 |
| chd3 | rbb4l | ENSDARP00000127601 | ENSDARP00000117542 | Chromodomain helicase DNA-binding protein 3. | Histone-binding protein RBBP7; Core histone-binding subunit that may target chromatin remodeling factors, histone acetyltransferases and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. | 0.968 |
| chd3 | rbbp4 | ENSDARP00000127601 | ENSDARP00000048143 | Chromodomain helicase DNA-binding protein 3. | Histone-binding protein RBBP4; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. | 0.933 |
| chd4a | chd3 | ENSDARP00000111640 | ENSDARP00000127601 | Chromodomain helicase DNA-binding protein 4a. | Chromodomain helicase DNA-binding protein 3. | 0.574 |
| chd4a | chd4b | ENSDARP00000111640 | ENSDARP00000152065 | Chromodomain helicase DNA-binding protein 4a. | Chromodomain helicase DNA-binding protein 4b. | 0.577 |
| chd4a | chd5 | ENSDARP00000111640 | ENSDARP00000133704 | Chromodomain helicase DNA-binding protein 4a. | Chromodomain helicase DNA-binding protein 5. | 0.561 |
| chd4a | gatad2b | ENSDARP00000111640 | ENSDARP00000036714 | Chromodomain helicase DNA-binding protein 4a. | GATA zinc finger domain-containing 2B. | 0.808 |
| chd4a | hdac1 | ENSDARP00000111640 | ENSDARP00000051798 | Chromodomain helicase DNA-binding protein 4a. | Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. | 0.737 |
| chd4a | mta1 | ENSDARP00000111640 | ENSDARP00000152737 | Chromodomain helicase DNA-binding protein 4a. | Metastasis-associated 1. | 0.877 |
| chd4a | mta2 | ENSDARP00000111640 | ENSDARP00000119097 | Chromodomain helicase DNA-binding protein 4a. | Metastasis-associated 1 family, member 2. | 0.968 |
| chd4a | mta3 | ENSDARP00000111640 | ENSDARP00000107969 | Chromodomain helicase DNA-binding protein 4a. | Metastasis-associated 1 family, member 3. | 0.904 |
| chd4a | rbb4l | ENSDARP00000111640 | ENSDARP00000117542 | Chromodomain helicase DNA-binding protein 4a. | Histone-binding protein RBBP7; Core histone-binding subunit that may target chromatin remodeling factors, histone acetyltransferases and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. | 0.890 |
| chd4a | rbbp4 | ENSDARP00000111640 | ENSDARP00000048143 | Chromodomain helicase DNA-binding protein 4a. | Histone-binding protein RBBP4; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. | 0.946 |
page 1 of 6