STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hbl4Hexose-binding lectin 4. (245 aa)    
Predicted Functional Partners:
lectin
Lectin.
  
   
 0.885
c3a.2
Complement component c3a, duplicate 2.
   
 
 0.819
c1s
Complement component 1, s subcomponent.
    
 
 0.804
c1r
Complement component 1, r subcomponent; Belongs to the peptidase S1 family.
   
 
 0.758
masp2
Mannan-binding lectin serine peptidase 2; Belongs to the peptidase S1 family.
   
 
 0.710
masp1
Mannan-binding lectin serine peptidase 1; Belongs to the peptidase S1 family.
   
 
 0.670
Q5RG15_DANRE
Si:dkey-241l7.5.
  
   
 0.654
c8b
Complement component 8, beta polypeptide.
   
  
 0.644
cd209
CD209 molecule.
      
 0.629
cfi
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 
 0.616
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.