Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
upk1aTetraspanin. (250 aa)    
Predicted Functional Partners:
zgc:194948
Uroplakin 2-like.
   
 
 0.957
upk3b
Uroplakin 3b.
  
  
 0.948
mplkip
M-phase-specific PLK1-interacting protein.
  
   
 0.669
tspan31
Tetraspanin-31.
      
 0.466
ENSDARP00000148418
Uncharacterized protein.
      
 0.466
mab21l3
Protein mab-21-like 3; Belongs to the mab-21 family.
  
     0.455
cd63
Tetraspanin.
      
 0.438
zgc:171579
Zgc:171579; Belongs to the G-protein coupled receptor 1 family.
  
     0.435
bbox1
Butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1.
      
 0.426
E7F7L0_DANRE
Si:dkey-118k5.3.
  
     0.424
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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