STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crklV-crk sarcoma virus CT10 oncogene homolog (Avian)-like. (305 aa)    
Predicted Functional Partners:
dock1
Dedicator of cytokinesis 1; Belongs to the DOCK family.
    
 0.993
gab1
GRB2-associated-binding protein 1.
    
 0.987
abl1
Tyrosine-protein kinase.
    
0.987
bcar1
BCAR1 scaffold protein, Cas family member.
    
 0.986
abl2
Tyrosine-protein kinase.
    
 0.984
rapgef1b
Rap guanine nucleotide exchange factor (GEF) 1b.
    
 0.983
rapgef1a
Rap guanine nucleotide exchange factor (GEF) 1a.
    
 0.981
crk
V-crk sarcoma virus CT10 oncogene homolog (Avian).
  
  
0.974
cbl
Cbl proto-oncogene, E3 ubiquitin protein ligase.
    
 0.972
mapk9
Mitogen-activated protein kinase.
    
 0.972
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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