Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zgc:73226Zgc:73226. (187 aa)    
Predicted Functional Partners:
bcl2l1
Bcl-XL-like protein 1.
   
 0.961
rhebl1
Ras homolog, mTORC1-binding-like 1.
    
 0.961
ulk1b
Unc-51-like autophagy-activating kinase 1.
     
 0.961
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
    
 0.958
bcl2a
B-cell leukemia/lymphoma 2.
    
 0.951
bcl2b
BCL2 apoptosis regulator b.
    
 0.951
zgc:92606
Zgc:92606.
    
  0.947
map1lc3cl
Microtubule-associated protein 1 light chain 3 gamma,-like.
    
  0.947
bnip4
BCL2-interacting protein 4.
     
  0.944
bnip3
BCL2-interacting protein 3.
     
  0.943
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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