STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6NE55_DANRESi:dkey-181c13.1. (188 aa)    
Predicted Functional Partners:
B8JM30_DANRE
Si:ch73-343l4.8.
  
  
 
0.543
F1R2Z5_DANRE
Si:ch73-343l4.2.
  
  
 
0.539
muc13b
Mucin 13b, cell surface-associated.
   
  0.535
E7FG10_DANRE
Si:ch73-105b23.6.
    
  0.533
muc5.1
Mucin 5.1, oligomeric mucus/gel-forming.
    
  0.533
muc5.2
Mucin 5.2.
    
  0.533
muc2.2
Mucin 2.2, oligomeric mucus/gel-forming.
    
  0.533
Muc2.1
Uncharacterized protein.
    
  0.533
ENSDARP00000142889
Si:ch211-196f2.3.
    
  0.500
E7F7A0_DANRE
Si:ch211-198m17.1.
     
  0.499
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.