Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rnf150aRing finger protein 150a. (418 aa)    
Predicted Functional Partners:
c2cd2
C2 calcium-dependent domain-containing 2.
      
 0.782
arl13a
ADP-ribosylation factor-like 13A.
      
 0.682
adprhl1
[Protein ADP-ribosylarginine] hydrolase-like protein 1; Belongs to the ADP-ribosylglycohydrolase family.
   
  
 0.598
dnai2a
Dynein, axonemal, intermediate chain 2a.
      
 0.596
nol9
Nucleolar protein 9.
   
  
 0.592
ubxn7
UBX domain protein 7.
   
 
 0.571
chchd1
Coiled-coil-helix-coiled-coil-helix domain-containing 1.
   
  
 0.499
ociad2
OCIA domain-containing 2.
      
 0.486
ttyh2l
Protein tweety homolog 2-like; Probable large-conductance Ca(2+)-activated chloride channel. Belongs to the tweety family.
    
 
 0.480
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 
 0.471
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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