STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acot9.1Acyl-CoA thioesterase 9, tandem duplicate 1. (434 aa)    
Predicted Functional Partners:
sat1a.1
Spermidine/spermine N1-acetyltransferase 1a, duplicate 1.
      
 0.860
cryl1
Crystallin, lambda 1.
  
 
 0.828
etfa
Electron-transfer-flavoprotein, alpha polypeptide.
    
 0.786
sat1a.2
Spermidine/spermine N1-acetyltransferase 1a, duplicate 2.
      
 0.741
sat1b
Spermidine/spermine N1-acetyl transferase 1.
      
 0.737
acadvl
Acyl-CoA dehydrogenase very long chain.
  
 
 0.731
eci1
Enoyl-CoA delta isomerase 1; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.683
acadm
Acyl-CoA dehydrogenase medium chain.
  
 
 0.683
acsm3
Acyl-CoA synthetase medium chain family member 3.
      
 0.664
acads
Acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain.
  
 
 0.633
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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