Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
foxd3 | pax3a | ENSDARP00000107660 | ENSDARP00000037761 | Forkhead box D3. | Transcription factor PAX3. | 0.943 |
foxd3 | six1b | ENSDARP00000107660 | ENSDARP00000028379 | Forkhead box D3. | Homeobox protein six1b; Transcription factor that is involved in the regulation of cell proliferation, apoptosis and embryonic development. Depending on context, functions as transcriptional repressor or activator. Transcriptional activation is enhanced by eya1 (in vitro). Plays an important role in the development of the inner ear, where it promotes hair cell proliferation and inhibits proliferation of neural progenitor cells. Required for normal myogenesis. Plays a role in the development of fast muscle fibers throughout the body, as well as the development of craniofacial muscles. R [...] | 0.592 |
foxd3 | snai2 | ENSDARP00000107660 | ENSDARP00000058570 | Forkhead box D3. | Snail homolog 2 (Drosophila). | 0.865 |
foxd3 | sox10 | ENSDARP00000107660 | ENSDARP00000100237 | Forkhead box D3. | HMG-box transcription factor Sox10. | 0.981 |
foxd3 | zic1 | ENSDARP00000107660 | ENSDARP00000106790 | Forkhead box D3. | ZIC family member 1 (Odd-paired homolog, Drosophila). | 0.869 |
myf5 | myf6 | ENSDARP00000109289 | ENSDARP00000040265 | Myogenic factor. | Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). | 0.718 |
myf5 | myog | ENSDARP00000109289 | ENSDARP00000010347 | Myogenic factor. | Myogenin. | 0.572 |
myf5 | pax3a | ENSDARP00000109289 | ENSDARP00000037761 | Myogenic factor. | Transcription factor PAX3. | 0.958 |
myf5 | six1b | ENSDARP00000109289 | ENSDARP00000028379 | Myogenic factor. | Homeobox protein six1b; Transcription factor that is involved in the regulation of cell proliferation, apoptosis and embryonic development. Depending on context, functions as transcriptional repressor or activator. Transcriptional activation is enhanced by eya1 (in vitro). Plays an important role in the development of the inner ear, where it promotes hair cell proliferation and inhibits proliferation of neural progenitor cells. Required for normal myogenesis. Plays a role in the development of fast muscle fibers throughout the body, as well as the development of craniofacial muscles. R [...] | 0.713 |
myf6 | myf5 | ENSDARP00000040265 | ENSDARP00000109289 | Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). | Myogenic factor. | 0.718 |
myf6 | myod1 | ENSDARP00000040265 | ENSDARP00000009713 | Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). | Myoblast determination protein 1 homolog; May act as a transcriptional activator that promotes transcription of muscle-specific target genes and plays a role in muscle differentiation. | 0.677 |
myf6 | myog | ENSDARP00000040265 | ENSDARP00000010347 | Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). | Myogenin. | 0.683 |
myf6 | pax3a | ENSDARP00000040265 | ENSDARP00000037761 | Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). | Transcription factor PAX3. | 0.882 |
myf6 | six1b | ENSDARP00000040265 | ENSDARP00000028379 | Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). | Homeobox protein six1b; Transcription factor that is involved in the regulation of cell proliferation, apoptosis and embryonic development. Depending on context, functions as transcriptional repressor or activator. Transcriptional activation is enhanced by eya1 (in vitro). Plays an important role in the development of the inner ear, where it promotes hair cell proliferation and inhibits proliferation of neural progenitor cells. Required for normal myogenesis. Plays a role in the development of fast muscle fibers throughout the body, as well as the development of craniofacial muscles. R [...] | 0.742 |
myod1 | myf6 | ENSDARP00000009713 | ENSDARP00000040265 | Myoblast determination protein 1 homolog; May act as a transcriptional activator that promotes transcription of muscle-specific target genes and plays a role in muscle differentiation. | Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). | 0.677 |
myod1 | myog | ENSDARP00000009713 | ENSDARP00000010347 | Myoblast determination protein 1 homolog; May act as a transcriptional activator that promotes transcription of muscle-specific target genes and plays a role in muscle differentiation. | Myogenin. | 0.641 |
myod1 | pax3a | ENSDARP00000009713 | ENSDARP00000037761 | Myoblast determination protein 1 homolog; May act as a transcriptional activator that promotes transcription of muscle-specific target genes and plays a role in muscle differentiation. | Transcription factor PAX3. | 0.945 |
myod1 | six1b | ENSDARP00000009713 | ENSDARP00000028379 | Myoblast determination protein 1 homolog; May act as a transcriptional activator that promotes transcription of muscle-specific target genes and plays a role in muscle differentiation. | Homeobox protein six1b; Transcription factor that is involved in the regulation of cell proliferation, apoptosis and embryonic development. Depending on context, functions as transcriptional repressor or activator. Transcriptional activation is enhanced by eya1 (in vitro). Plays an important role in the development of the inner ear, where it promotes hair cell proliferation and inhibits proliferation of neural progenitor cells. Required for normal myogenesis. Plays a role in the development of fast muscle fibers throughout the body, as well as the development of craniofacial muscles. R [...] | 0.781 |
myog | myf5 | ENSDARP00000010347 | ENSDARP00000109289 | Myogenin. | Myogenic factor. | 0.572 |
myog | myf6 | ENSDARP00000010347 | ENSDARP00000040265 | Myogenin. | Myogenic factor 6; Involved in muscle differentiation (myogenic factor). Induces fibroblasts to differentiate into myoblasts. Probable sequence specific DNA-binding protein (By similarity). | 0.683 |
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