STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrps18aMitochondrial ribosomal protein S18A. (210 aa)    
Predicted Functional Partners:
mrps18c
Mitochondrial ribosomal protein S18C.
   
 0.999
mrps18b
Mitochondrial ribosomal protein S18B.
   
 0.997
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.981
mrps33
Mitochondrial ribosomal protein S33.
   
 0.977
mrps14
Novel protein similar to vertebrate mitochondrial ribosomal protein S14 (MRPS14, zgc:153664).
   
 0.975
mrpl21
Mitochondrial ribosomal protein L21.
   
 
 0.968
mrps15
28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.
   
 0.967
mrps5
Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 0.964
mrps16
Mitochondrial ribosomal protein S16.
   
 0.964
dap3
Death-associated protein 3.
   
 0.963
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.