STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kbtbd12Kelch repeat and BTB domain-containing protein 12. (623 aa)    
Predicted Functional Partners:
kcng3
Potassium voltage-gated channel, subfamily G, member 3; Belongs to the potassium channel family.
      
 0.877
ccdc36
Coiled-coil domain-containing 36.
      
 0.862
klc4
Kinesin light chain 4.
    
 
 0.860
tmem204
Transmembrane protein 204.
   
  
 0.834
rrp36
Ribosomal RNA-processing 36.
   
  
 0.823
xpc
Xeroderma pigmentosum, complementation group C.
  
   
 0.817
trappc6b
Trafficking protein particle complex subunit 6b; Component of a transport protein particle (TRAPP) complex that may function in specific stages of inter-organelle traffic. Specifically involved in the early development of neural circuitry, likely by controlling the frequency and amplitude of intracellular calcium transients implicated in the regulation of neuron differentiation and survival.
      
 0.803
sipa1l2
Signal-induced proliferation-associated 1-like 2.
      
 0.755
pkdccb
Protein kinase domain-containing, cytoplasmic b.
    
 
 0.751
rab11fip3
Rab11 family-interacting protein 3.
      
 0.744
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.