STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lect2lLeukocyte cell-derived chemotaxin 2-like. (157 aa)    
Predicted Functional Partners:
irgf1
Immunity-related GTPase family, f1.
      
 0.623
E7F7Z4_DANRE
Si:ch211-170d8.8.
   
  
 0.569
LOC103910168
Si:dkey-12f6.5.
   
  
 0.564
E7F6Y1_DANRE
Si:ch211-232p21.6.
      
 0.560
ahsa1b
AHA1, activator of heat shock protein ATPase homolog 1b.
      
 0.498
F1QG23_DANRE
Si:ch211-287a12.9.
   
  
 0.488
ccl38.6
C-C motif chemokine.
   
  
 0.483
oat
Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
      
 0.480
sgk2a
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
      
 0.479
trim35-23
Tripartite motif-containing 35-23.
      
 0.478
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.