Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
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taf5lTAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (601 aa)    
Predicted Functional Partners:
taf12
TAF12 RNA polymerase II, TATA box-binding protein (TBP)-associated factor.
   
 
 0.976
taf6l
TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.
   
 
 0.974
taf6
TAF6 RNA polymerase II, TATA box-binding protein (TBP)-associated factor.
   
 
 0.971
taf10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 
 0.966
taf11
TAF11 RNA polymerase II, TATA box-binding protein (TBP)-associated factor.
    
 
 0.962
taf5
TAF5 RNA polymerase II, TATA box-binding protein (TBP)-associated factor.
  
 
0.956
taf7
TAF7 RNA polymerase II, TATA box-binding protein (TBP)-associated factor.
    
 
 0.952
taf1
Transcription initiation factor TFIID subunit.
   
 
 0.948
taf9
TAF9 RNA polymerase II, TATA box-binding protein (TBP)-associated factor.
    
 
 0.948
taf2
Transcription initiation factor TFIID subunit 2; Transcription factor TFIID is one of the general factors required for accurate and regulated initiation by RNA polymerase II. TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. It requires core promoter-specific cofactors for productive transcription stimulation. TAF2 stabilizes TFIID binding to core promoter (By similarity).
    
 
 0.945
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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