STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rab36RAB36, member RAS oncogene family. (262 aa)    
Predicted Functional Partners:
rab30
RAB30, member RAS oncogene family.
  
  
 
0.812
rilpl2
RILP-like protein 2; Involved in cell shape and neuronal morphogenesis, positively regulating the establishment and maintenance of dendritic spines. Plays a role in cellular protein transport (By similarity); Belongs to the RILPL family.
      
 0.809
mcf2a
MCF.2 cell line-derived-transforming sequence a.
    
 
 0.748
hmgxb4a
HMG box domain-containing 4a.
      
 0.743
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 
 0.730
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.708
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.678
mical3a-2
Protein-methionine sulfoxide oxidase mical3a.
   
  
 0.671
megf6a
Multiple EGF-like-domains 6a.
    
 
 0.671
fgf13b
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.669
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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