Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrp11Low density lipoprotein receptor-related protein 11. (429 aa)    
Predicted Functional Partners:
lrrc4.2
Leucine-rich repeat-containing 4.2.
      
 0.781
rnf10
Ring finger protein 10.
      
 0.780
lrrc4.1
Leucine-rich repeat-containing 4.1.
   
  
 0.765
selenbp1
Methanethiol oxidase; Catalyzes the oxidation of methanethiol, an organosulfur compound known to be produced in substantial amounts by gut bacteria (By similarity). Selenium-binding protein which may be involved in the sensing of reactive xenobiotics in the cytoplasm. May be involved in intra-Golgi protein transport (By similarity).
    
 
 0.674
or106-8
Odorant receptor, family G, subfamily 106, member 8.
      
 0.594
crmp1
Collapsin response mediator protein 1.
   
  
 0.592
or130-1-2
Odorant receptor, family H, subfamily 130, member 1.
      
 0.565
or130-1
Odorant receptor, family H, subfamily 130, member 1.
      
 0.558
lrrc4bb
Leucine-rich repeat-containing 4Bb.
   
  
 0.557
wu:fb59d01
Wu:fb59d01.
      
 0.553
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.