Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
adtrp1Androgen-dependent TFPI-regulating protein 1. (242 aa)    
Predicted Functional Partners:
cdcp2
CUB domain-containing protein 2.
   
 
 0.676
cubn
Cubilin (intrinsic factor-cobalamin receptor).
   
 
 0.676
tfpia
Tissue factor pathway inhibitor.
      
 0.579
tespa1
Thymocyte-expressed, positive selection-associated 1.
      
 0.511
tfpi2
Tissue factor pathway inhibitor.
      
 0.483
lcp1
Plastin-2; Actin-binding protein. Plays a role in the activation of T- cells (By similarity).
      
 0.462
prelid3b
Chromosome 20 open reading frame 45.
      
 0.458
znf831
Zinc finger protein 831.
      
 0.443
pcolceb
Similar to procollagen C-endopeptidase enhancer.
   
 
 0.422
pcolce2b
Procollagen C-endopeptidase enhancer 2b.
   
 
 0.422
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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