Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCYL2Si:ch211-244b2.1. (929 aa)    
Predicted Functional Partners:
dus2
Dihydrouridine synthase 2.
      
 0.978
cox17
COX17 cytochrome c oxidase assembly homolog (S. cerevisiae).
    
   0.918
aimp1a
Aminoacyl tRNA synthetase complex-interacting multifunctional protein 1a.
      
 0.755
aimp2
Aminoacyl tRNA synthetase complex-interacting multifunctional protein 2.
      
 0.734
aars1
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.
      
 0.664
pcmt
Protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl and D- aspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins (By similarity).
    
   0.630
clint1b
Clathrin interactor 1b.
   
 
 0.617
clint1a
Clathrin interactor 1a.
   
 
 0.617
B8JJX1_DANRE
Si:ch73-54n14.2.
     
  0.572
camkmt
Calmodulin-lysine N-methyltransferase.
     
  0.572
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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