STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btbd6bBTB/POZ domain-containing protein 6-B; Adapter protein for the cul3 E3 ubiquitin-protein ligase complex. Promotes the export of zbtb16/plzf from the nucleus to the cytoplasm and targets zbtb16/plzf for ubiquitination and degradation. Up-regulates neurog1 expression and antagonizes zbtb16/plzf, to promote neurogenesis (By similarity). (482 aa)    
Predicted Functional Partners:
tnrc18
Trinucleotide repeat-containing 18.
    
 
 0.746
znf296
Zinc finger protein 296.
    
 
 0.743
kctd6b
BTB/POZ domain-containing protein KCTD6; Probable substrate-specific adapter of a cullin-containing E3 ubiquitin-protein ligase complex mediating the ubiquitination and subsequent proteasomal degradation of target proteins.
    
 0.721
zbtb44
Zinc finger and BTB domain-containing 44.
   
  
 0.677
kbtbd13
Kelch repeat and BTB (POZ) domain-containing 13.
    
 0.673
myt1la
Myelin transcription factor 1-like, a.
      
 0.665
tbr1a
T-box brain transcription factor 1a.
   
  
 0.651
klhl29
Kelch-like family member 29.
      
 0.630
zbtb7c
Zinc finger and BTB domain-containing 7C.
    
 
 0.629
btbd11b
Ankyrin repeat and BTB/POZ domain-containing protein BTBD11-B.
      
 0.619
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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