Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tiprlTIP41, TOR-signaling pathway regulator-like (S. cerevisiae). (269 aa)    
Predicted Functional Partners:
ppp6c
Serine/threonine-protein phosphatase.
   
 
 0.990
igbp1
Immunoglobulin (CD79A)-binding protein 1.
    
 0.989
tbcelb
Tubulin folding cofactor E-like b.
      
 0.955
ppp4ca
Serine/threonine-protein phosphatase 4 catalytic subunit A; Protein phosphatase that regulates many processes such as microtubule organization at centrosomes; Belongs to the PPP phosphatase family. PP-4 (PP-X) subfamily.
    
 
 0.927
ppp4cb
Serine/threonine-protein phosphatase 4 catalytic subunit B; Protein phosphatase that regulates many processes such as microtubule organization at centrosomes; Belongs to the PPP phosphatase family. PP-4 (PP-X) subfamily.
    
 
 0.927
ppp4r2a
Serine/threonine-protein phosphatase 4 regulatory subunit 2-A; Regulatory subunit of serine/threonine-protein phosphatase 4 (PP4C); Belongs to the PPP4R2 family.
    
 
 0.900
ppp4r2b
Serine/threonine-protein phosphatase 4 regulatory subunit 2-B; Regulatory subunit of serine/threonine-protein phosphatase 4 (PP4); Belongs to the PPP4R2 family.
    
 
 0.900
mhc2dbb
Major histocompatibility complex class II DBB gene.
    
 
 0.781
ppp2ca
Serine/threonine-protein phosphatase.
    
 
 0.755
zgc:56064
Serine/threonine-protein phosphatase.
    
 
 0.755
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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