STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prkab1bProtein kinase, AMP-activated, beta 1 non-catalytic subunit, b. (260 aa)    
Predicted Functional Partners:
prkag1
Protein kinase, AMP-activated, gamma 1 non-catalytic subunit.
   
 0.997
prkaa1
Non-specific serine/threonine protein kinase.
   
 0.995
prkag2a
Protein kinase, AMP-activated, gamma 2 non-catalytic subunit a.
   
 0.995
prkaa2
Non-specific serine/threonine protein kinase.
    
 0.993
prkag3b
Protein kinase, AMP-activated, gamma 3b non-catalytic subunit.
   
 0.993
prkag2b
Protein kinase, AMP-activated, gamma 2 non-catalytic subunit b.
   
 0.993
prkag3a
Protein kinase, AMP-activated, gamma 3a non-catalytic subunit.
   
 0.969
stk11
Serine/threonine kinase 11; Belongs to the protein kinase superfamily.
   
 0.946
prkab1a
Protein kinase, AMP-activated, beta 1 non-catalytic subunit, a.
  
 
0.939
acacb
Acetyl-CoA carboxylase beta.
    
 0.922
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.