Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cdc42bpabNon-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1716 aa)    
Predicted Functional Partners:
mapre2
Microtubule-associated protein, RP/EB family, member 2.
    
 
 0.819
ankrd11
Ankyrin repeat domain 11.
   
 0.738
cdc42l2
Cell division cycle 42-like 2.
   
 0.723
smg7
SMG7 nonsense mediated mRNA decay factor.
   
 
 0.723
rhoq
Ras homolog gene family, member Q.
   
 0.676
rac1a
Ras-related C3 botulinum toxin substrate 1 (Rho family, small GTP binding protein Rac1).
   
  0.619
myrf
Myelin regulatory factor.
      
 0.599
rabgap1l
RAB GTPase-activating protein 1-like.
      
 0.595
tmem98
Transmembrane protein 98.
      
 0.594
iqgap1
IQ motif-containing GTPase-activating protein 1.
   
 0.579
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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