Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
zgc:136493Zgc:136493; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (344 aa)    
Predicted Functional Partners:
agxtb
Serine--pyruvate aminotransferase.
    
 0.932
agxta
Serine--pyruvate aminotransferase.
    
 0.932
hao2
Hydroxyacid oxidase 2 (long chain).
  
 
 0.914
hao1
Hydroxyacid oxidase (glycolate oxidase) 1.
  
 
 0.914
glyctk
Glycerate kinase; Belongs to the glycerate kinase type-2 family.
  
 
 0.911
agxt2
Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.908
pgp
Phosphoglycolate phosphatase; Belongs to the HAD-like hydrolase superfamily.
  
 
 0.905
ENSDARP00000132681
Amine oxidase.
   
 
 0.901
glo1
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
  
 0.898
sdsl
Serine dehydratase-like.
  
 
 0.897
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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