Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
chordc1aCysteine and histidine-rich domain (CHORD)-containing 1a. (339 aa)    
Predicted Functional Partners:
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
   
 0.909
ppp5c
Serine/threonine-protein phosphatase.
   
 0.864
heatr5b
HEAT repeat-containing 5B.
      
 0.838
ovca2
Esterase OVCA2; Belongs to the LovG family.
      
 0.814
lysmd2
LysM and putative peptidoglycan-binding domain-containing protein 2.
      
 0.799
ahsa1b
AHA1, activator of heat shock protein ATPase homolog 1b.
   
 
 0.796
wdr75
WD repeat-containing protein 75; Ribosome biogenesis factor. Involved in nucleolar processing of pre-18S ribosomal RNA. Required for optimal pre-ribosomal RNA transcription by RNA polymerase I.
   
  
 0.792
trafd1
TRAF-type zinc finger domain-containing 1.
    
 
 0.783
hsp90b1
Heat shock protein 90, beta (Grp94), member 1.
   
 0.769
ttc4
Tetratricopeptide repeat domain 4.
    
 
 0.766
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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