STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crygn2Gamma-crystallin N-B; Crystallins are the dominant structural components of the vertebrate eye lens. (206 aa)    
Predicted Functional Partners:
lim2.2
Lens intrinsic membrane protein 2.2.
   
  
 0.766
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 
 0.731
lim2.1
Lens intrinsic membrane protein 2.1.
  
 
 0.726
lgsn
Lengsin, lens protein with glutamine synthetase domain; Belongs to the glutamine synthetase family.
   
  
 0.715
tsc2
TSC complex subunit 2.
    
 
 0.666
ENSDARP00000153406
DUF3384 domain-containing protein.
    
 
 0.666
tsc1a
TSC complex subunit 1a.
   
 
 0.662
tsc1b
TSC complex subunit 1b.
   
 
 0.662
hsf4
Heat shock transcription factor 4.
   
  
 0.659
rptor
Regulatory-associated protein of MTOR, complex 1.
    
 
 0.641
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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