STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zgc:163061Zgc:163061. (114 aa)    
Predicted Functional Partners:
mcee
Methylmalonyl CoA epimerase.
      
 0.680
myh9b
Myosin, heavy chain 9b, non-muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.594
grifin
Grifin; Binds lactose.
      
 0.567
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.559
zgc:92591
Histone H2B; Belongs to the histone H2B family.
   
 
 0.537
ENSDARP00000142232
Histone H2B; Belongs to the histone H2B family.
   
 
 0.517
ano9a
Histone H2B; Belongs to the histone H2B family.
   
 
 0.507
zgc:194989
Histone H2B; Belongs to the histone H2B family.
   
 
 0.490
zgc:171759
Histone H2B; Belongs to the histone H2B family.
   
 
 0.490
zgc:171759-2
Histone H2B; Belongs to the histone H2B family.
   
 
 0.490
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.